CCinxPred?
Old Analysis Attempts
CMap Data
Sanity Check
Tx pred
Lvl5 lig pred
Lvl5 followup
Lvl4 lig pred
Lig pred on new CT
Lig prob on new CT
Figures For Paper
Fig 1
Fig 1 (all genes)
Fig 2
Fig 2 (all genes)
Fig 3
Fig 3 (all genes)
Fig 4
Paper Figs v2
Z-score correlation
DE overlap
DE overlap (FDR)
Receptor availability
NicheNet
Probability
Breast lines only, level 5 data
Breast lines only, level 4 data
Breast lines only, level 3 data
All cell lines, level 5 data
All cell lines, level 4 data
All cell lines, level 3 data