CCinxPred?
Old Analysis Attempts
CMap Data
Sanity Check
Tx pred
Lvl5 lig pred
Lvl5 followup
Lvl4 lig pred
Lig pred on new CT
Lig prob on new CT
Figures For Paper
Fig 1
Fig 1 (all genes)
Fig 2
Fig 2 (all genes)
Fig 3
Fig 3 (all genes)
Fig 4
Fig2: Correlation between samples
By ligand
By cell line
By ligand per cell line
By treatment condition
(Replicate sharing the same ligand, cell line, dosage, and time of exposure)
Comparison of all correlation distributions
Comparison of correlation distributions per ligand