Saber (Sequence Annotator for Biomedical Entities and Relations) is a deep-learning based tool for information extraction in the biomedical domain.
The goal is that Saber will eventually perform all the important steps in text-mining of biomedical literature:
- Coreference resolution ()
- Biomedical named entity recognition (BioNER) ()
- Entity linking / grounding / normalization ()
- Simple relation extraction ()
- Event extraction ()
Pull requests are welcome! If you encounter any bugs, please open an issue in the GitHub repository.